I ripped off a 0-65 Mph run this morning, and sent off the log file to Terry. He said things looked fine, but he did notice that bit 7 was enabled in the user settings by the previous owner. Bit 7 lowers throttle sensitivity, which was totally counterproductive for me as I have a BMS pedal tuner to increase throttle sensitivity. I had noticed the difference in pedal feel since installing the JB4, and had picked a higher setting on my pedal tuner to compensate.
I am starting to think that there was possibly nothing wrong with the way the JB4 was operating initially, it could be a combination of the car not being up to full operating temperatures as I just went for a short test drive initially, along with the decreased pedal feel could have thrown me off as well. I have also noticed that each time I have driven the car since switching to map 2 it's felt noticeably faster than the previous run, so the ecu/JB4 may still be adapting as well. The car felt just ridiculously fast on my drive to work tonight, so I am going to have to show some restraint if I intend to hang onto my driver's license for any amount of time.